Semantic e-Science
Papers from the 2007 AAAI Workshop
Huajun Chen, Yimin Wang, Kei Cheung, and Zhaohui Wu, Program Cochairs
Technical Report WS-07-11 published by The AAAI Press, Menlo Park, California
This technical report is also available in book and CD format.
Contents
Organizing Committee / vii
Huajun Chen, Yimin Wang, Kei Cheung, and Zhaohui Wu
Preface / vii
Huajun Chen, Yimin Wang, Kei Cheung, and Zhaohui Wu
Regular Papers
Semantic Data Integration Environment for Biomedical Research (Ontological Framework for e-Sience and Imaginizer) / 1
Vadim Astakhov, B. Sanders, Jeffrey S. Grethe, E. Ross, D. Little, A.Gupta, and T. Astakhova
Query Translation for Ontology-extended Data Sources / 9
Jie Bao, Doina Caragea, and Vasant Honavar
Towards Privacy Aware Data Analysis Workflows for e-Science / 17
William K. Cheung and Yolanda Gil
Traceability Mechanisms for Bioinformatics Scientific Workflows / 26
Luciano A. Digiampietri, Claudia Bauzer Medeiros, João C. Setubal, and Roger S. Barga
Using the Semantic Grid to Support Evidence-Based Policy Assessment / 34
Peter Edwards, Alison Chorley, Edoardo Pignotti, and Feikje Hielkema
Semantic Web Services for Interdisciplinary Scientific Data Query and Retrieval / 42
Peter Fox, Luca Cinquini, Deborah McGuinness, Patrick West, Jose Garcia, James L. Benedict, and Stephan Zednik
Adding Semantics to Social Websites for Citizen Science / 51
Andriy Parafiynyk, Cynthia Sims Parr, Joel Sachs, and Tim Finin
Semantic Annotation for Persistence / 57
Stephen L. Reed
Short Papers
Toward Using Bio-Ontologies in the Semantic Web: Trade-offs between Ontology Languages / 65
C. Maria Keet and Mariano Rodríguez
Matching Request Profile and Service Profile for Semantic Web Service Discovery / 69
Hui Peng, Zhongzhi Shi, and Lirong Qiu
Semantic e-Science and Geology / 73
Clinton Smyth, David Poole, and Rita Sharma
Semantic Graph Mining for e-Science / 77
Tong Yu, Xiaohong Jiang, and Yi Feng